Protein Shape Retrieval
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2018Author
Langenfeld, Florent 
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Proteins are macromolecules central to biological processes that display a dynamic and complex surface. They display multiple conformations differing by local (residue side-chain) or global (loop or domain) structural changes which can impact drastically their global and local shape. Since the structure of proteins is linked to their function and the disruption of their interactions can lead to a disease state, it is of major importance to characterize their shape. In the present work, we report the performance in enrichment of six shape-retrieval methods (3D-FusionNet, GSGW, HAPT, DEM, SIWKS and WKS) on a 2 267 protein structures dataset generated for this protein shape retrieval track of SHREC'18.
BibTeX
@inproceedings {10.2312:3dor.20181053,
booktitle = {Eurographics Workshop on 3D Object Retrieval},
editor = {Telea, Alex and Theoharis, Theoharis and Veltkamp, Remco},
title = {{Protein Shape Retrieval}},
author = {Langenfeld, Florent and Axenopoulos, Apostolos and Chatzitofis, Anargyros and Craciun, Daniela and Daras, Petros and Du, Bowen and Giachetti, Andrea and Lai, Yu-kun and Li, Haisheng and Li, Yingbin and Masoumi, Majid and Peng, Yuxu and Rosin, Paul L. and Sirugue, Jeremy and Sun, Li and Thermos, Spyridon and Toews, Matthew and Wei, Yang and Wu, Yujuan and Zhai, Yujia and Zhao, Tianyu and Zheng, Yanping and Montes, Matthieu},
year = {2018},
publisher = {The Eurographics Association},
ISSN = {1997-0471},
ISBN = {978-3-03868-053-6},
DOI = {10.2312/3dor.20181053}
}
booktitle = {Eurographics Workshop on 3D Object Retrieval},
editor = {Telea, Alex and Theoharis, Theoharis and Veltkamp, Remco},
title = {{Protein Shape Retrieval}},
author = {Langenfeld, Florent and Axenopoulos, Apostolos and Chatzitofis, Anargyros and Craciun, Daniela and Daras, Petros and Du, Bowen and Giachetti, Andrea and Lai, Yu-kun and Li, Haisheng and Li, Yingbin and Masoumi, Majid and Peng, Yuxu and Rosin, Paul L. and Sirugue, Jeremy and Sun, Li and Thermos, Spyridon and Toews, Matthew and Wei, Yang and Wu, Yujuan and Zhai, Yujia and Zhao, Tianyu and Zheng, Yanping and Montes, Matthieu},
year = {2018},
publisher = {The Eurographics Association},
ISSN = {1997-0471},
ISBN = {978-3-03868-053-6},
DOI = {10.2312/3dor.20181053}
}